Rice
Oryza sativa
| Analysis | Locus | Causal Agent (Genus & Species) | Molecular Marker Systems |
| Rice Blast | Pi44(t) | Pyricularia grisea (teleomorph Magnaporthe grisea) | - |
| Rice Blast | Piz, Piz-t, Pit, Pik, Pik-m, Pikp,Pita, Pita-2, Pib | Magnaporthe grisea | - |
| Rice Blast | Pi1, Piz-5 and Pita | Magnaporthae grisea (Anamorphe pyricularia oryza Cav.) | - |
| Gall Midge | Gm2 | Orseolia oryzae | - |
| Gall Midge | Gm4t | Orseolia oryzae | - |
| Gall Midge | Gm7 | Orseolia oryzae | - |
| Green Rice Leafhopper (GRLH) | Grh3(t) | Nephotettix cincticeps | - |
| Temperature Sensitive Genetic Male-Sterile (TGMS) | Fd | - | - |
| Bacterial Leaf Blight | xa5, xa13, and Xa21 | Xanthomonas oryzae pv. oryzae (Xoo). | - |
| Bacterial Leaf Blight | Xa4 | Xanthomonas oryzae pv. oryzae (Xoo). | - |
| Variety Identification and Fingerprinting | - | - | SCAR, CAPS, RAPD, STS, SSR, TRAP, SRAP |